C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042889 Setd5-001 ENSMUSG00000034269 10090 + 6:113077365-113153435 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042889
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042889 5.630±0.96 3.931±0.41 7.737±0.56 8.114±2.98 3.313±1.41 3.466±0.77 1.939±0.51 2.055±0.25 2.939±1.75 5.335±1.70 1.782±0.58 4.057±1.48 8.004±1.39 2.811±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QC CIL_0004QC_0002 CGP 6:113046225-113153435
CIL_0002W7 CIL_0002W7_0002 CGP 6:113077365-113195384

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302463 SETD5-003 protein_coding Homo_sapiens 0 5638
ENST00000399686 SETD5-015 protein_coding Homo_sapiens 0 3500
ENST00000402198 SETD5-201 protein_coding Homo_sapiens 0 6913
ENST00000406341 SETD5-001 protein_coding Homo_sapiens 0 7022
ENST00000407969 SETD5-004 protein_coding Homo_sapiens 0 6433
ENST00000413704 SETD5-016 nonsense_mediated_decay Homo_sapiens 0 4372
ENST00000415650 SETD5-021 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000421188 SETD5-013 protein_coding Homo_sapiens 0 955
ENST00000431285 SETD5-007 nonsense_mediated_decay Homo_sapiens 0 1042
ENST00000442373 SETD5-023 protein_coding Homo_sapiens 0 1301
ENST00000443339 SETD5-002 nonsense_mediated_decay Homo_sapiens 0 3602
ENST00000450326 SETD5-020 protein_coding Homo_sapiens 0 1029
ENST00000459941 SETD5-014 retained_intron Homo_sapiens 0 488
ENST00000463180 SETD5-019 retained_intron Homo_sapiens 0 285
ENST00000466242 SETD5-006 retained_intron Homo_sapiens 0 4831
ENST00000466826 SETD5-029 retained_intron Homo_sapiens 0 424
ENST00000468208 SETD5-022 processed_transcript Homo_sapiens 0 283
ENST00000476740 SETD5-030 processed_transcript Homo_sapiens 0 542
ENST00000478475 SETD5-010 processed_transcript Homo_sapiens 0 279
ENST00000478961 SETD5-012 processed_transcript Homo_sapiens 0 774
ENST00000479538 SETD5-028 processed_transcript Homo_sapiens 0 327
ENST00000486465 SETD5-026 retained_intron Homo_sapiens 0 928
ENST00000488236 SETD5-011 processed_transcript Homo_sapiens 0 929
ENST00000490791 SETD5-008 processed_transcript Homo_sapiens 0 512
ENST00000492939 SETD5-027 retained_intron Homo_sapiens 0 706
ENST00000493918 SETD5-005 retained_intron Homo_sapiens 0 6324
ENST00000497213 SETD5-024 processed_transcript Homo_sapiens 0 586

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