C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109537 Cpne2-002 ENSMUSG00000034361 10090 + 8:94533067-94570390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109537
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109537 10.226±5.78 2.799±0.00 3.871±0.35 2.634±0.60 7.960±1.42 0.931±0.12 1.821±0.00 0.496±0.18 1.713±0.54 0.918±0.52 1.898±0.45 0.675±0.32 0.383±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051Y CIL_00051Y_0003 CGP 8:94472763-94570529
CIL_000524 CIL_000524_0003 CGP 8:94532990-94601726

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000087656 CPNE5 (1 of 2)-201 protein_coding Danio_rerio 0.000000000008 77
ENSDART00000143152 CPNE5 (1 of 2)-001 protein_coding Danio_rerio 0.000000000008 77
ENST00000290776 CPNE2-001 protein_coding Homo_sapiens 0 2276
ENST00000535318 CPNE2-002 protein_coding Homo_sapiens 0 2268
ENST00000565766 CPNE2-009 protein_coding Homo_sapiens 0 508
ENST00000565874 CPNE2-003 protein_coding Homo_sapiens 0 2106
ENST00000565951 CPNE2-005 processed_transcript Homo_sapiens 0 398
ENST00000566042 CPNE2-004 retained_intron Homo_sapiens 0 699
ENST00000566259 CPNE2-008 protein_coding Homo_sapiens 0 267
ENST00000566910 CPNE2-006 processed_transcript Homo_sapiens 0 902
ENST00000567011 CPNE2-010 retained_intron Homo_sapiens 0 540
ENST00000567487 CPNE2-007 protein_coding Homo_sapiens 0 632

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