C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156377 Cpne2-004 ENSMUSG00000034361 10090 + 8:94562650-94570114 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000156377
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000156377 27.763±0.00 10.830±1.50 7.179±0.00 17.830±3.87 18.674±4.24 2.339±0.00 5.558±1.15 2.446±0.89 6.250±2.15 10.117±2.55 1.650±0.53 0.859±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051Y CIL_00051Y_0003 CGP 8:94472763-94570529
CIL_000524 CIL_000524_0003 CGP 8:94532990-94601726

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000055274 protein_coding Danio_rerio 0.00004 53
ENST00000290776 CPNE2-001 protein_coding Homo_sapiens 0 699
ENST00000535318 CPNE2-002 protein_coding Homo_sapiens 0 699
ENST00000565874 CPNE2-003 protein_coding Homo_sapiens 0 699
ENST00000565951 CPNE2-005 processed_transcript Homo_sapiens 0 311
ENST00000566042 CPNE2-004 retained_intron Homo_sapiens 0 486
ENST00000566910 CPNE2-006 processed_transcript Homo_sapiens 0 699
ENST00000567011 CPNE2-010 retained_intron Homo_sapiens 0 486

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