C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034780 B3galt1 10090 + 2:67565871-68122689 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042456 B3galt1-001 68104671-68120514 protein_coding
  ENSMUST00000112346 B3galt1-201 68117713-68122689 protein_coding
  ENSMUST00000180887 B3galt1-002 67748212-68118150 protein_coding
  ENSMUST00000188614 B3galt1-003 67565871-67810894 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042456ENSMUST00000112346ENSMUST00000180887ENSMUST00000188614
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042456 N/A N/A N/A 0.797±0.00 0.189±0.00 N/A 0.166±0.06 0.048±0.01 N/A N/A N/A 0.048±0.00 0.014±0.00 0.094±0.06
ENSMUST00000112346 1.071±0.38 0.487±0.12 0.277±0.06 6.993±1.90 0.734±0.07 0.227±0.07 0.229±0.04 0.162±0.07 1.154±1.09 0.331±0.03 0.271±0.16 0.232±0.17 0.044±0.03 0.107±0.06
ENSMUST00000180887 N/A N/A N/A 6.604±0.00 N/A N/A N/A N/A N/A 0.600±0.00 N/A 0.145±0.00 0.073±0.00 0.136±0.00
ENSMUST00000188614 N/A 2.772±0.00 N/A N/A N/A 0.246±0.08 N/A 0.280±0.10 N/A N/A N/A 0.779±0.25 0.194±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HO CIL_0000HO_0002 CGP 2:67446002-68122689
CIL_00063B CIL_00063B_0002 CGP 2:67565871-68472268

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0006486 IEA protein glycosylation
GO:0008499 IDA UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
GO:0009312 IDA oligosaccharide biosynthetic process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075154 B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 protein_coding Danio_rerio
ENSG00000172318 B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 protein_coding Homo_sapiens

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