C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112346 B3galt1-201 ENSMUSG00000034780 10090 + 2:68117713-68122689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112346
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112346 1.071±0.38 0.487±0.12 0.277±0.06 6.993±1.90 0.734±0.07 0.227±0.07 0.229±0.04 0.162±0.07 1.154±1.09 0.331±0.03 0.271±0.16 0.232±0.17 0.044±0.03 0.107±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HO CIL_0000HO_0002 CGP 2:67446002-68122689
CIL_00063B CIL_00063B_0002 CGP 2:67565871-68472268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0006486 IEA protein glycosylation
GO:0008499 IDA UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
GO:0009312 IDA oligosaccharide biosynthetic process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113248 B3GALT1-201 protein_coding Danio_rerio 0 385
ENST00000392690 B3GALT1-001 protein_coding Homo_sapiens 0 1585

Loading