C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180887 B3galt1-002 ENSMUSG00000034780 10090 + 2:67748212-68118150 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungOvaryPlacentaTestisENSMUST00000180887
Transcript ID Brain Lung Ovary Placenta Testis
ENSMUST00000180887 6.604±0.00 0.600±0.00 0.145±0.00 0.073±0.00 0.136±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HO CIL_0000HO_0002 CGP 2:67446002-68122689
CIL_00063B CIL_00063B_0002 CGP 2:67565871-68472268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0006486 IEA protein glycosylation
GO:0008499 IDA UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
GO:0009312 IDA oligosaccharide biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392690 B3GALT1-001 protein_coding Homo_sapiens 0 366

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