C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082290 Slc39a12-002 ENSMUSG00000036949 10090 + 2:14388399-14494977 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000082290
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000082290 0.053±0.05 0.046±0.00 0.064±0.01 1.969±1.84 0.017±0.00 0.057±0.02 0.008±0.00 0.029±0.02 0.041±0.01 0.150±0.07 0.160±0.07 0.042±0.04 0.128±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A6 CIL_0005A6_0002 CGP 2:14229414-14494977
CIL_0005AA CIL_0005AA_0002 CGP 2:14388316-14987908

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005385 IDA zinc ion transmembrane transporter activity
GO:0005886 IDA plasma membrane
GO:0007165 IDA signal transduction
GO:0010975 IMP regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0031113 IMP regulation of microtubule polymerization
GO:0031982 IEA vesicle
GO:0048471 IDA perinuclear region of cytoplasm
GO:0071578 IDA zinc ion transmembrane import

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377369 SLC39A12-201 protein_coding Homo_sapiens 0 1700
ENST00000377371 SLC39A12-001 protein_coding Homo_sapiens 0 1707
ENST00000377374 SLC39A12-002 protein_coding Homo_sapiens 0 1094
ENST00000539911 SLC39A12-202 protein_coding Homo_sapiens 0 1626

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