C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114731 Slc39a12-001 ENSMUSG00000036949 10090 + 2:14388316-14494975 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000114731
Transcript ID Adipose Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000114731 0.005±0.00 0.011±0.01 0.005±0.00 0.006±0.00 0.032±0.02 0.025±0.01 0.018±0.01 0.015±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A6 CIL_0005A6_0002 CGP 2:14229414-14494977
CIL_0005AA CIL_0005AA_0002 CGP 2:14388316-14987908

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005385 IDA zinc ion transmembrane transporter activity
GO:0005886 IDA plasma membrane
GO:0007165 IDA signal transduction
GO:0010975 IMP regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0031113 IMP regulation of microtubule polymerization
GO:0048471 IDA perinuclear region of cytoplasm
GO:0071578 IDA zinc ion transmembrane import

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377369 SLC39A12-201 protein_coding Homo_sapiens 0 1149
ENST00000377371 SLC39A12-001 protein_coding Homo_sapiens 0 1094
ENST00000377374 SLC39A12-002 protein_coding Homo_sapiens 0 1646
ENST00000539911 SLC39A12-202 protein_coding Homo_sapiens 0 1024

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