C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038900 Rpl12 10090 + 2:32961559-32964496 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102811 Rpl12-002 32961740-32964043 processed_transcript
  ENSMUST00000125415 Rpl12-004 32961740-32963311 processed_transcript
  ENSMUST00000126610 Rpl12-001 32961559-32964496 protein_coding
  ENSMUST00000133842 Rpl12-005 32961732-32962938 processed_transcript
  ENSMUST00000134912 Rpl12-007 32963389-32964035 processed_transcript
  ENSMUST00000144644 Rpl12-006 32962266-32963066 processed_transcript
  ENSMUST00000154340 Rpl12-003 32961729-32963633 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102811ENSMUST00000125415ENSMUST00000126610
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102811 200.649±48.03 N/A 429.249±77.78 87.636±29.95 178.953±120.22 73.037±0.00 78.266±19.06 88.651±19.54 179.696±137.68 N/A 156.645±25.07 282.280±303.11 453.604±285.03 67.040±15.86
ENSMUST00000125415 147.525±0.00 N/A N/A N/A 201.011±9.32 166.416±23.10 N/A N/A 230.512±0.00 N/A 84.565±11.31 129.463±34.21 N/A N/A
ENSMUST00000126610 63.327±0.00 169.951±14.60 N/A N/A 156.608±11.99 162.351±57.52 28.341±11.48 65.708±8.63 126.108±99.16 113.426±0.00 31.760±10.83 123.451±47.42 N/A 42.016±7.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_0002XQ CIL_0002XQ_0002 CGP 2:32925216-32964496

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006691 rpl12 ribosomal protein L12 protein_coding Danio_rerio
ENSG00000197958 RPL12 ribosomal protein L12 protein_coding Homo_sapiens

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