C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134912 Rpl12-007 ENSMUSG00000038900 10090 + 2:32963389-32964035 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_0002XQ CIL_0002XQ_0002 CGP 2:32925216-32964496

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000141676 rpl12-002 processed_transcript Danio_rerio 0.000000002 69
ENSDART00000135459 rpl12-003 retained_intron Danio_rerio 0.000000002 69
ENSDART00000008807 rpl12-001 protein_coding Danio_rerio 0.000000002 69
ENST00000310055 RP11-344H11.4-001 unprocessed_pseudogene Homo_sapiens 1e-34 150
ENST00000361436 RPL12-001 protein_coding Homo_sapiens 0 195
ENST00000374520 RPL12P1-001 processed_pseudogene Homo_sapiens 2e-31 139
ENST00000406185 RP11-480N24.3-001 processed_pseudogene Homo_sapiens 4e-33 143
ENST00000424565 RPL12P2-001 processed_pseudogene Homo_sapiens 1e-39 167
ENST00000424633 RPL12L3-001 processed_pseudogene Homo_sapiens 1e-34 150
ENST00000425565 RPL12P29-001 processed_pseudogene Homo_sapiens 2e-31 139
ENST00000428087 RP11-248I9.2-001 processed_pseudogene Homo_sapiens 1e-19 100
ENST00000431782 RP11-169K16.6-001 processed_pseudogene Homo_sapiens 8e-36 154
ENST00000432393 AC093698.2-001 processed_pseudogene Homo_sapiens 1e-24 117
ENST00000432629 RPL12P4-001 processed_pseudogene Homo_sapiens 2e-37 159
ENST00000439896 RPL12P1-001 processed_pseudogene Homo_sapiens 2e-31 139
ENST00000448702 RPL12P1-001 processed_pseudogene Homo_sapiens 2e-31 139
ENST00000460355 NBEAL1-003 retained_intron Homo_sapiens 0 195
ENST00000467671 KIFC1-003 processed_transcript Homo_sapiens 4e-20 102
ENST00000471280 RPL12P38-001 transcribed_processed_pseudogene Homo_sapiens 1e-33 147
ENST00000472214 CTB-46B19.1-001 processed_pseudogene Homo_sapiens 1e-33 147
ENST00000477007 RP11-106M3.1-001 processed_pseudogene Homo_sapiens 1e-34 150
ENST00000481802 CTC-250I14.1-001 processed_pseudogene Homo_sapiens 5e-33 145
ENST00000482081 RPL12P8-001 processed_pseudogene Homo_sapiens 2e-28 130
ENST00000484010 RP11-428G5.2-001 processed_pseudogene Homo_sapiens 4e-34 148
ENST00000485633 RPL12P33-001 processed_pseudogene Homo_sapiens 2e-27 126
ENST00000486695 KIFC1-003 retained_intron Homo_sapiens 4e-20 102
ENST00000486874 RPL12P37-001 processed_pseudogene Homo_sapiens 5e-28 128
ENST00000492999 KIFC1-003 processed_transcript Homo_sapiens 4e-20 102
ENST00000495231 RP11-434O22.1-001 processed_pseudogene Homo_sapiens 2e-32 143
ENST00000497322 RPL12-002 processed_transcript Homo_sapiens 0 209
ENST00000497825 RPL12-003 processed_transcript Homo_sapiens 0 209
ENST00000536368 RPL12-201 protein_coding Homo_sapiens 2e-36 156
ENST00000588627 RPL12P38-002 processed_transcript Homo_sapiens 7e-33 147
ENST00000603116 RP4-741O10.1-001 processed_pseudogene Homo_sapiens 2e-31 137

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