C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102811 Rpl12-002 ENSMUSG00000038900 10090 + 2:32961740-32964043 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000102811
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000102811 200.649±48.03 429.249±77.78 87.636±29.95 178.953±120.22 73.037±0.00 78.266±19.06 88.651±19.54 179.696±137.68 156.645±25.07 282.280±303.11 453.604±285.03 67.040±15.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_0002XQ CIL_0002XQ_0002 CGP 2:32925216-32964496

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000141676 rpl12-002 processed_transcript Danio_rerio 0.0000000005 69
ENSDART00000135459 rpl12-003 retained_intron Danio_rerio 0.0000000005 69
ENSDART00000008807 rpl12-001 protein_coding Danio_rerio 0.0000000005 69
ENST00000310055 RP11-344H11.4-001 unprocessed_pseudogene Homo_sapiens 0 486
ENST00000361436 RPL12-001 protein_coding Homo_sapiens 6e-38 161
ENST00000374520 RPL12P1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000406185 RP11-480N24.3-001 processed_pseudogene Homo_sapiens 1e-37 158
ENST00000424565 RPL12P2-001 processed_pseudogene Homo_sapiens 0 512
ENST00000424633 RPL12L3-001 processed_pseudogene Homo_sapiens 0 556
ENST00000425565 RPL12P29-001 processed_pseudogene Homo_sapiens 0 342
ENST00000428087 RP11-248I9.2-001 processed_pseudogene Homo_sapiens 0 198
ENST00000431782 RP11-169K16.6-001 processed_pseudogene Homo_sapiens 0 494
ENST00000432393 AC093698.2-001 processed_pseudogene Homo_sapiens 0 494
ENST00000432629 RPL12P4-001 processed_pseudogene Homo_sapiens 0 575
ENST00000439896 RPL12P1-001 processed_pseudogene Homo_sapiens 0 532
ENST00000448702 RPL12P1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000460355 NBEAL1-003 retained_intron Homo_sapiens 4e-37 161
ENST00000467671 KIFC1-003 processed_transcript Homo_sapiens 0 484
ENST00000471280 RPL12P38-001 transcribed_processed_pseudogene Homo_sapiens 0 521
ENST00000472214 CTB-46B19.1-001 processed_pseudogene Homo_sapiens 0 453
ENST00000477007 RP11-106M3.1-001 processed_pseudogene Homo_sapiens 0 531
ENST00000481802 CTC-250I14.1-001 processed_pseudogene Homo_sapiens 0 499
ENST00000482081 RPL12P8-001 processed_pseudogene Homo_sapiens 0 507
ENST00000484010 RP11-428G5.2-001 processed_pseudogene Homo_sapiens 0 475
ENST00000485633 RPL12P33-001 processed_pseudogene Homo_sapiens 0 494
ENST00000486695 KIFC1-003 retained_intron Homo_sapiens 0 484
ENST00000486874 RPL12P37-001 processed_pseudogene Homo_sapiens 0 468
ENST00000492999 KIFC1-003 processed_transcript Homo_sapiens 0 479
ENST00000495231 RP11-434O22.1-001 processed_pseudogene Homo_sapiens 0 516
ENST00000497322 RPL12-002 processed_transcript Homo_sapiens 8.00001e-42 176
ENST00000497825 RPL12-003 processed_transcript Homo_sapiens 3.00018e-42 176
ENST00000536368 RPL12-201 protein_coding Homo_sapiens 2e-36 156
ENST00000588627 RPL12P38-002 processed_transcript Homo_sapiens 0 545
ENST00000603116 RP4-741O10.1-001 processed_pseudogene Homo_sapiens 4e-32 139

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