C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002Y2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016163-ENSDARG00000077581 CGP 7955 2:8501496-8625237
GeneTranscriptPositionBiotype
ENSDARG00000016163 (usp33)
ubiquitin specific peptidase 33 		ENSDART00000018114 (usp33-001) 8501496-8561837 protein_coding
ENSDART00000133037 (usp33-002) 8501513-8516163 protein_coding
ENSDART00000137872 (usp33-003) 8501506-8510413 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002Y2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025437-ENSMUSG00000039068 CGP 10090 3:152346478-152462826
GeneTranscriptPositionBiotype
ENSMUSG00000025437 (Usp33)
ubiquitin specific peptidase 33 		ENSMUST00000026507 (Usp33-001) 152346478-152393612 protein_coding
ENSMUST00000117492 (Usp33-002) 152346489-152393330 protein_coding
ENSMUST00000123237 (Usp33-003) 152346512-152371905 nonsense_mediated_decay
ENSMUST00000138575 (Usp33-005) 152361898-152368491 processed_transcript
ENSMUST00000142969 (Usp33-004) 152346515-152358348 retained_intron
ENSMUSG00000039058 (Ak5)
adenylate kinase 5 		ENSMUST00000045262 (Ak5-201) 152462815-152668140 protein_coding
ENSMUSG00000039068 (Zzz3)
zinc finger, ZZ domain containing 3 		ENSMUST00000089982 (Zzz3-002) 152396684-152459477 protein_coding
ENSMUST00000106100 (Zzz3-001) 152396003-152462826 protein_coding
ENSMUST00000106101 (Zzz3-201) 152396694-152462826 protein_coding
ENSMUST00000106103 (Zzz3-003) 152395473-152459474 protein_coding
ENSMUST00000135044 (Zzz3-005) 152457417-152458535 processed_transcript
ENSMUST00000138115 (Zzz3-004) 152395525-152427620 processed_transcript
ENSMUST00000150802 (Zzz3-006) 152396032-152449128 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Y2_0001ENSDARG00000016163ENSDART00000018114ENSDART00000133037ENSDART00000137872CIL_0002Y2_0002ENSMUSG00000025437ENSMUST00000026507ENSMUST00000117492ENSMUST00000123237ENSMUST00000138575ENSMUST00000142969ENSMUSG00000039058ENSMUST00000045262ENSMUSG00000039068ENSMUST00000089982ENSMUST00000106100ENSMUST00000106101ENSMUST00000106103ENSMUST00000135044ENSMUST00000138115ENSMUST00000150802
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Y2_0001ENSDARG00000016163ENSDART00000018114CIL_0002Y2_0002ENSMUSG00000025437ENSMUST00000026507ENSMUST00000117492ENSMUST00000138575ENSMUSG00000039058ENSMUST00000045262ENSMUSG00000039068ENSMUST00000089982ENSMUST00000106100ENSMUST00000106101ENSMUST00000106103ENSMUST00000150802
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016163 ENSDART00000018114 N/A N/A N/A 33.697±6.15 N/A N/A 4.622±4.50 5.104±5.06 1.069±0.00 N/A 3.881±0.00 N/A N/A N/A
ENSDART00000133037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025437 ENSMUST00000026507 1.597±0.00 1.738±0.50 1.941±0.61 4.490±0.94 1.717±0.66 1.609±0.37 0.805±0.05 1.637±0.00 2.369±0.95 3.596±0.00 0.871±0.11 1.640±0.65 2.973±0.37 N/A
ENSMUST00000117492 5.999±0.35 3.768±1.11 11.431±1.27 27.675±2.71 3.626±1.83 5.051±1.78 3.048±0.51 6.274±0.49 7.852±4.57 7.210±2.10 4.109±0.44 9.901±9.34 14.646±2.17 3.039±0.15
ENSMUST00000123237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.189±0.00
ENSMUST00000142969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039058 ENSMUST00000045262 N/A N/A N/A 51.491±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039068 ENSMUST00000089982 2.528±0.53 N/A N/A N/A 1.696±0.06 N/A 0.587±0.00 N/A 1.254±0.53 N/A 0.965±0.33 8.203±2.47 7.305±3.63 2.851±0.00
ENSMUST00000106100 3.700±0.42 2.400±1.41 2.777±0.05 6.890±2.38 1.084±0.16 1.919±1.13 1.444±0.43 3.162±0.79 1.860±0.77 2.213±1.11 0.817±0.26 5.672±0.98 3.307±1.56 0.673±0.00
ENSMUST00000106101 N/A N/A 3.569±0.03 3.218±0.56 2.018±0.00 0.850±0.00 0.749±0.00 N/A 1.142±0.57 N/A 0.570±0.07 7.086±0.26 1.756±0.12 1.354±0.00
ENSMUST00000106103 3.865±1.96 4.460±1.02 3.126±0.30 3.356±0.00 3.219±0.55 2.971±0.33 1.304±0.25 2.929±0.00 3.187±1.36 2.852±0.00 N/A 5.753±1.28 6.012±1.18 4.120±0.62
ENSMUST00000135044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.524±0.00

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