C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 9 (sodium/hydrogen exchanger), member 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039463 Slc9a8 10090 + 2:167421712-167477000 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047815 Slc9a8-001 167421712-167477000 protein_coding
  ENSMUST00000073873 Slc9a8-201 167421721-167476998 protein_coding
  ENSMUST00000109218 Slc9a8-004 167421721-167474636 protein_coding
  ENSMUST00000124139 Slc9a8-003 167421737-167436049 retained_intron
  ENSMUST00000125855 Slc9a8-011 167450966-167467724 processed_transcript
  ENSMUST00000131956 Slc9a8-005 167421732-167476999 processed_transcript
  ENSMUST00000135353 Slc9a8-008 167421730-167446950 retained_intron
  ENSMUST00000139673 Slc9a8-006 167421742-167476999 processed_transcript
  ENSMUST00000141400 Slc9a8-009 167421738-167467699 processed_transcript
  ENSMUST00000148454 Slc9a8-007 167451155-167476999 processed_transcript
  ENSMUST00000149607 Slc9a8-010 167424119-167467726 processed_transcript
  ENSMUST00000150326 Slc9a8-002 167421723-167426134 retained_intron
  ENSMUST00000155585 Slc9a8-012 167451055-167469076 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047815ENSMUST00000073873ENSMUST00000109218ENSMUST00000135353ENSMUST00000141400ENSMUST00000148454ENSMUST00000155585
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047815 5.893±0.50 8.868±1.50 8.395±1.16 5.197±1.33 6.114±1.98 9.881±3.09 6.270±1.22 16.384±4.81 6.771±1.15 5.679±0.60 7.630±0.64 4.526±1.35 6.549±3.09 7.632±3.85
ENSMUST00000073873 N/A N/A N/A N/A 3.300±0.00 N/A N/A N/A N/A N/A 1.791±0.00 N/A N/A N/A
ENSMUST00000109218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.245±1.09
ENSMUST00000135353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.915±0.00 N/A N/A
ENSMUST00000141400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.428±0.00
ENSMUST00000148454 2.834±0.07 4.220±0.00 4.792±0.54 2.418±1.06 5.241±1.36 5.175±1.55 2.117±0.03 56.690±27.91 3.504±1.08 4.277±0.51 1.882±0.00 4.754±1.74 1.358±0.00 1.803±1.38
ENSMUST00000155585 N/A N/A N/A N/A 19.489±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I4 CIL_0008I4_0002 VISTA 2:167024358-167627099
CIL_00087E CIL_00087E_0002 VISTA 2:167269881-167871243
CIL_000277 CIL_000277_0002 CGP 2:167298444-167477000
CIL_0001VJ CIL_0001VJ_0002 CGP 2:167421712-167492887

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0006813 IDA potassium ion transport
GO:0006814 IDA sodium ion transport
GO:0015385 IDA sodium:proton antiporter activity
GO:0015386 IDA potassium:proton antiporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0051453 IDA regulation of intracellular pH
GO:0071805 IDA potassium ion transmembrane transport
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020699 slc9a8 solute carrier family 9 (sodium/hydrogen exchanger), member 8 protein_coding Danio_rerio
ENSG00000197818 SLC9A8 solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 protein_coding Homo_sapiens

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