C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 9 (sodium/hydrogen exchanger), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109218 Slc9a8-004 ENSMUSG00000039463 10090 + 2:167421721-167474636 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000109218
Transcript ID Testis
ENSMUST00000109218 6.245±1.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I4 CIL_0008I4_0002 VISTA 2:167024358-167627099
CIL_00087E CIL_00087E_0002 VISTA 2:167269881-167871243
CIL_000277 CIL_000277_0002 CGP 2:167298444-167477000
CIL_0001VJ CIL_0001VJ_0002 CGP 2:167421712-167492887

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0006813 IDA potassium ion transport
GO:0006814 IDA sodium ion transport
GO:0015385 IDA sodium:proton antiporter activity
GO:0015386 IDA potassium:proton antiporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0051453 IDA regulation of intracellular pH
GO:0071805 IDA potassium ion transmembrane transport
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000021062 slc9a8-001 protein_coding Danio_rerio 0 942
ENST00000361573 SLC9A8-001 protein_coding Homo_sapiens 0 1794
ENST00000417961 SLC9A8-201 protein_coding Homo_sapiens 0 1485
ENST00000489787 SLC9A8-002 processed_transcript Homo_sapiens 0 244

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