C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 9 (sodium/hydrogen exchanger), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047815 Slc9a8-001 ENSMUSG00000039463 10090 + 2:167421712-167477000 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047815
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047815 5.893±0.50 8.868±1.50 8.395±1.16 5.197±1.33 6.114±1.98 9.881±3.09 6.270±1.22 16.384±4.81 6.771±1.15 5.679±0.60 7.630±0.64 4.526±1.35 6.549±3.09 7.632±3.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I4 CIL_0008I4_0002 VISTA 2:167024358-167627099
CIL_00087E CIL_00087E_0002 VISTA 2:167269881-167871243
CIL_000277 CIL_000277_0002 CGP 2:167298444-167477000
CIL_0001VJ CIL_0001VJ_0002 CGP 2:167421712-167492887

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0006813 IDA potassium ion transport
GO:0006814 IDA sodium ion transport
GO:0015385 IDA sodium:proton antiporter activity
GO:0015386 IDA potassium:proton antiporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0051453 IDA regulation of intracellular pH
GO:0071805 IDA potassium ion transmembrane transport
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000021062 slc9a8-001 protein_coding Danio_rerio 0 1009
ENST00000361573 SLC9A8-001 protein_coding Homo_sapiens 0 2145
ENST00000417961 SLC9A8-201 protein_coding Homo_sapiens 0 1552
ENST00000489787 SLC9A8-002 processed_transcript Homo_sapiens 0 246

Loading