C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000277_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158470-ENSG00000197818 CGP 9606 20:49632945-49892242
GeneTranscriptPositionBiotype
ENSG00000158470 (B4GALT5)
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 		ENST00000371711 (B4GALT5-001) 49632945-49713878 protein_coding
ENSG00000197818 (SLC9A8)
solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 		ENST00000361573 (SLC9A8-001) 49812881-49892242 protein_coding
ENST00000417961 (SLC9A8-201) 49812713-49892241 protein_coding
ENST00000489787 (SLC9A8-002) 49812894-49815444 processed_transcript
ENST00000490250 (SLC9A8-003) 49886371-49892242 processed_transcript
ENSG00000237788 (RP5-1041C10.3)
 ENST00000429893 (RP5-1041C10.3-001) 49829125-49831085 processed_pseudogene
ENSG00000276031 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000466981 (Metazoa_SRP.1-350) 49721949-49722247 misc_RNA
CIL_000277_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017929-ENSMUSG00000039463 CGP 10090 2:167298444-167477000
GeneTranscriptPositionBiotype
ENSMUSG00000017929 (B4galt5)
UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 		ENSMUST00000109221 (B4galt5-001) 167298444-167349183 protein_coding
ENSMUST00000133557 (B4galt5-004) 167307610-167313900 processed_transcript
ENSMUST00000149698 (B4galt5-002) 167301200-167305698 protein_coding
ENSMUST00000155623 (B4galt5-003) 167307610-167313855 processed_transcript
ENSMUSG00000039463 (Slc9a8)
solute carrier family 9 (sodium/hydrogen exchanger), member 8 		ENSMUST00000047815 (Slc9a8-001) 167421712-167477000 protein_coding
ENSMUST00000073873 (Slc9a8-201) 167421721-167476998 protein_coding
ENSMUST00000109218 (Slc9a8-004) 167421721-167474636 protein_coding
ENSMUST00000124139 (Slc9a8-003) 167421737-167436049 retained_intron
ENSMUST00000125855 (Slc9a8-011) 167450966-167467724 processed_transcript
ENSMUST00000131956 (Slc9a8-005) 167421732-167476999 processed_transcript
ENSMUST00000135353 (Slc9a8-008) 167421730-167446950 retained_intron
ENSMUST00000139673 (Slc9a8-006) 167421742-167476999 processed_transcript
ENSMUST00000141400 (Slc9a8-009) 167421738-167467699 processed_transcript
ENSMUST00000148454 (Slc9a8-007) 167451155-167476999 processed_transcript
ENSMUST00000149607 (Slc9a8-010) 167424119-167467726 processed_transcript
ENSMUST00000150326 (Slc9a8-002) 167421723-167426134 retained_intron
ENSMUST00000155585 (Slc9a8-012) 167451055-167469076 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000277_0001ENSG00000158470ENST00000371711ENSG00000197818ENST00000361573ENST00000417961ENST00000489787ENST00000490250ENSG00000237788ENST00000429893ENSG00000276031ENST00000466981CIL_000277_0002ENSMUSG00000017929ENSMUST00000109221ENSMUST00000133557ENSMUST00000149698ENSMUST00000155623ENSMUSG00000039463ENSMUST00000047815ENSMUST00000073873ENSMUST00000109218ENSMUST00000124139ENSMUST00000125855ENSMUST00000131956ENSMUST00000135353ENSMUST00000139673ENSMUST00000141400ENSMUST00000148454ENSMUST00000149607ENSMUST00000150326ENSMUST00000155585
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000277_0001ENSG00000158470ENST00000371711ENSG00000197818ENST00000361573ENST00000417961ENST00000490250ENSG00000237788ENST00000429893ENSG00000276031ENST00000466981CIL_000277_0002ENSMUSG00000017929ENSMUST00000109221ENSMUSG00000039463ENSMUST00000047815ENSMUST00000073873ENSMUST00000109218ENSMUST00000135353ENSMUST00000141400ENSMUST00000148454ENSMUST00000155585
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158470 ENST00000371711 27.666±0.00 14.382±0.00 2.644±0.00 8.520±3.64 11.942±4.66 7.789±0.70 6.347±3.99 8.047±6.71 5.239±2.34 17.651±13.86 16.494±14.28 20.368±7.34 16.607±1.36 16.768±2.78
ENSG00000197818 ENST00000361573 2.185±0.00 2.757±0.00 0.462±0.00 0.768±0.09 1.600±0.91 0.822±0.00 1.090±0.59 2.186±0.08 2.232±0.01 1.407±0.00 0.539±0.00 1.434±0.85 2.622±0.52 4.412±0.12
ENST00000417961 N/A N/A N/A 0.499±0.00 N/A N/A N/A N/A N/A 0.771±0.00 2.627±0.00 0.566±0.00 0.388±0.00 0.584±0.00
ENST00000489787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490250 N/A 1.989±0.00 N/A N/A 0.972±0.00 0.176±0.00 0.103±0.00 1.425±0.00 1.730±0.00 0.492±0.29 1.732±0.13 0.795±0.21 N/A 0.823±0.00
ENSG00000237788 ENST00000429893 0.067±0.00 0.184±0.00 0.057±0.00 0.075±0.01 0.204±0.16 0.197±0.16 0.129±0.03 0.136±0.00 0.033±0.00 0.088±0.06 0.056±0.03 0.117±0.09 0.015±0.00 0.009±0.00
ENSG00000276031 ENST00000466981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017929 ENSMUST00000109221 7.713±3.65 17.987±6.29 5.850±0.65 7.743±1.62 7.909±2.75 8.972±3.43 2.798±0.34 17.665±3.75 5.005±2.64 5.722±1.83 2.421±0.84 7.643±3.42 9.053±3.35 2.168±0.64
ENSMUST00000133557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039463 ENSMUST00000047815 5.893±0.50 8.868±1.50 8.395±1.16 5.197±1.33 6.114±1.98 9.881±3.09 6.270±1.22 16.384±4.81 6.771±1.15 5.679±0.60 7.630±0.64 4.526±1.35 6.549±3.09 7.632±3.85
ENSMUST00000073873 N/A N/A N/A N/A 3.300±0.00 N/A N/A N/A N/A N/A 1.791±0.00 N/A N/A N/A
ENSMUST00000109218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.245±1.09
ENSMUST00000124139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.915±0.00 N/A N/A
ENSMUST00000139673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.428±0.00
ENSMUST00000148454 2.834±0.07 4.220±0.00 4.792±0.54 2.418±1.06 5.241±1.36 5.175±1.55 2.117±0.03 56.690±27.91 3.504±1.08 4.277±0.51 1.882±0.00 4.754±1.74 1.358±0.00 1.803±1.38
ENSMUST00000149607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155585 N/A N/A N/A N/A 19.489±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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