C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB11 family interacting protein 2 (class I)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040022 Rab11fip2 10090 - 19:59902884-59943654 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051996 Rab11fip2-001 59903696-59943364 protein_coding
  ENSMUST00000170819 Rab11fip2-002 59906916-59943000 protein_coding
  ENSMUST00000171986 Rab11fip2-003 59902884-59943654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051996ENSMUST00000170819ENSMUST00000171986
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051996 N/A 0.980±0.00 1.554±0.21 0.491±0.00 N/A N/A N/A N/A N/A 0.299±0.00 N/A 0.189±0.10 N/A
ENSMUST00000170819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.163±0.00 0.337±0.00 14.293±0.00
ENSMUST00000171986 1.830±1.14 3.059±0.45 6.162±0.02 2.153±0.78 0.449±0.00 1.050±0.00 1.215±0.59 0.580±0.21 2.617±0.28 0.662±0.00 2.258±0.35 0.571±0.41 4.488±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KI CIL_0007KI_0003 UCNEbase 19:59043463-60359839
CIL_0007XD CIL_0007XD_0002 VISTA 19:59337323-59938561
CIL_0008ND CIL_0008ND_0002 VISTA 19:59417098-60018467
CIL_0004H1 CIL_0004H1_0003 CGP 19:59458372-59943654
CIL_0008KY CIL_0008KY_0002 VISTA 19:59565705-60167187
CIL_0008MJ CIL_0008MJ_0002 VISTA 19:59715442-60316837
CIL_0004H4 CIL_0004H4_0003 CGP 19:59902884-60226697

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0015031 IEA protein transport
GO:0019901 IEA protein kinase binding
GO:0030010 IEA establishment of cell polarity
GO:0035773 IMP insulin secretion involved in cellular response to glucose stimulus
GO:0042803 IEA protein homodimerization activity
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045055 IMP regulated secretory pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075596 BX842696.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000107560 RAB11FIP2 RAB11 family interacting protein 2 (class I) protein_coding Homo_sapiens

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