C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB11 family interacting protein 2 (class I)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171986 Rab11fip2-003 ENSMUSG00000040022 10090 - 19:59902884-59943654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171986
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171986 1.830±1.14 3.059±0.45 6.162±0.02 2.153±0.78 0.449±0.00 1.050±0.00 1.215±0.59 0.580±0.21 2.617±0.28 0.662±0.00 2.258±0.35 0.571±0.41 4.488±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KI CIL_0007KI_0003 UCNEbase 19:59043463-60359839
CIL_0007XD CIL_0007XD_0002 VISTA 19:59337323-59938561
CIL_0008ND CIL_0008ND_0002 VISTA 19:59417098-60018467
CIL_0004H1 CIL_0004H1_0003 CGP 19:59458372-59943654
CIL_0008KY CIL_0008KY_0002 VISTA 19:59565705-60167187
CIL_0008MJ CIL_0008MJ_0002 VISTA 19:59715442-60316837
CIL_0004H4 CIL_0004H4_0003 CGP 19:59902884-60226697

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355624 RAB11FIP2-001 protein_coding Homo_sapiens 0 1474
ENST00000369199 RAB11FIP2-201 protein_coding Homo_sapiens 0 1131
ENST00000483413 RAB11FIP2-002 retained_intron Homo_sapiens 0 830

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