C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: aryl hydrocarbon receptor nuclear translocator-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040187 Arntl2 10090 + 6:146796055-146833529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080530 Arntl2-201 146805530-146832646 protein_coding
  ENSMUST00000111636 Arntl2-003 146805530-146832646 protein_coding
  ENSMUST00000111638 Arntl2-005 146805530-146832646 protein_coding
  ENSMUST00000111639 Arntl2-001 146796065-146833529 protein_coding
  ENSMUST00000123444 Arntl2-002 146796055-146805578 processed_transcript
  ENSMUST00000129788 Arntl2-004 146805530-146832646 nonsense_mediated_decay
  ENSMUST00000136594 Arntl2-006 146820431-146823154 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080530ENSMUST00000111636ENSMUST00000111638ENSMUST00000111639ENSMUST00000123444ENSMUST00000129788ENSMUST00000136594
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080530 N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 0.286±0.00 N/A N/A N/A N/A
ENSMUST00000111636 N/A N/A N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A
ENSMUST00000111638 N/A N/A N/A N/A N/A 0.400±0.10 N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A
ENSMUST00000111639 0.594±0.30 0.306±0.02 3.747±0.72 0.319±0.06 0.513±0.18 0.254±0.12 0.133±0.07 N/A 0.131±0.05 0.222±0.12 0.238±0.00 0.629±0.15 0.162±0.00 0.133±0.11
ENSMUST00000123444 7.182±0.00 1.891±0.33 N/A N/A N/A 2.259±0.57 N/A N/A 0.562±0.16 N/A N/A 7.026±4.17 N/A N/A
ENSMUST00000129788 0.949±0.00 N/A N/A 0.448±0.00 1.299±0.38 N/A N/A 0.220±0.00 0.198±0.13 0.215±0.06 0.246±0.11 0.354±0.16 0.204±0.13 0.344±0.04
ENSMUST00000136594 N/A N/A N/A 2.452±0.00 N/A 0.488±0.05 N/A N/A N/A N/A N/A 1.079±0.36 0.697±0.00 0.335±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056J CIL_00056J_0002 CGP 6:146724995-146833529
CIL_00056I CIL_00056I_0002 CGP 6:146796055-146871406

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000982 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007165 IEA signal transduction
GO:0007623 IEA circadian rhythm
GO:0042753 IMP positive regulation of circadian rhythm
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0070888 IDA E-box binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000029153 ARNTL2 aryl hydrocarbon receptor nuclear translocator-like 2 protein_coding Homo_sapiens

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