C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aryl hydrocarbon receptor nuclear translocator-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129788 Arntl2-004 ENSMUSG00000040187 10090 + 6:146805530-146832646 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129788
Transcript ID Adipose Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129788 0.949±0.00 0.448±0.00 1.299±0.38 0.220±0.00 0.198±0.13 0.215±0.06 0.246±0.11 0.354±0.16 0.204±0.13 0.344±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056J CIL_00056J_0002 CGP 6:146724995-146833529
CIL_00056I CIL_00056I_0002 CGP 6:146796055-146871406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005667 IEA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0007165 IEA signal transduction
GO:0042753 IMP positive regulation of circadian rhythm
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity
GO:0070888 IDA E-box binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261178 ARNTL2-006 protein_coding Homo_sapiens 0 593
ENST00000266503 ARNTL2-001 protein_coding Homo_sapiens 0 593
ENST00000311001 ARNTL2-005 protein_coding Homo_sapiens 0 593
ENST00000395901 ARNTL2-004 protein_coding Homo_sapiens 0 593
ENST00000457040 ARNTL2-008 protein_coding Homo_sapiens 0 593
ENST00000542388 ARNTL2-007 protein_coding Homo_sapiens 0 593
ENST00000544915 ARNTL2-002 protein_coding Homo_sapiens 0 593
ENST00000546179 ARNTL2-003 protein_coding Homo_sapiens 7e-32 143

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