C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189556 St8sia4-004 ENSMUSG00000040710 10090 - 1:95618551-95667535 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverOvaryTestisENSMUST00000189556
Transcript ID Adrenal Colon Kidney Liver Ovary Testis
ENSMUST00000189556 0.139±0.05 0.048±0.02 0.084±0.00 0.052±0.03 0.065±0.03 0.040±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z8 CIL_0004Z8_0002 CGP 1:95313623-95667571
CIL_0004ZB CIL_0004ZB_0002 CGP 1:95587682-96872171

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231461 ST8SIA4-001 protein_coding Homo_sapiens 0 1339
ENST00000261890 RAB11A-001 protein_coding Homo_sapiens 0.000000003 69
ENST00000287957 GATAD1-001 protein_coding Homo_sapiens 0.000000000001 81
ENST00000359786 MYO1C-001 protein_coding Homo_sapiens 0.00000000000003 86
ENST00000361007 MYO1C-201 protein_coding Homo_sapiens 0.00000000000003 86
ENST00000394807 ZBTB3-001 protein_coding Homo_sapiens 0.00000000004 75
ENST00000401725 AC019109.1-001 processed_pseudogene Homo_sapiens 0.000000000000003 88
ENST00000438665 MYO1C-010 protein_coding Homo_sapiens 0.00000000000003 86
ENST00000451528 ST8SIA4-002 protein_coding Homo_sapiens 0 863
ENST00000480612 LCA5L-011 retained_intron Homo_sapiens 0.00000000001 75
ENST00000507360 ST8SIA4-004 processed_transcript Homo_sapiens 0 351
ENST00000523381 ST8SIA4-003 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000523988 SLC25A30-004 retained_intron Homo_sapiens 0.00000001 68
ENST00000549743 KMT2D-005 processed_transcript Homo_sapiens 0.000000001 68
ENST00000555661 PTGR2-001 protein_coding Homo_sapiens 0.000002 60
ENST00000575158 MYO1C-002 protein_coding Homo_sapiens 0.00000000000003 86
ENST00000578223 PER1-011 retained_intron Homo_sapiens 0.000000000000004 86
ENST00000601372 ZNF558-001 protein_coding Homo_sapiens 0.00000002 68

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