C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043336 St8sia4-001 ENSMUSG00000040710 10090 - 1:95587682-95667571 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043336
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043336 1.953±0.24 0.365±0.19 1.083±0.02 4.984±3.05 2.939±0.64 0.363±0.19 1.120±0.10 0.436±0.12 0.417±0.33 5.651±0.51 0.537±0.10 0.657±0.30 0.405±0.14 0.028±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z8 CIL_0004Z8_0002 CGP 1:95313623-95667571
CIL_0004ZB CIL_0004ZB_0002 CGP 1:95587682-96872171

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001574 IEA ganglioside biosynthetic process
GO:0003828 IDA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0006491 IEA N-glycan processing
GO:0009311 IEA oligosaccharide metabolic process
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231461 ST8SIA4-001 protein_coding Homo_sapiens 0 2146
ENST00000451528 ST8SIA4-002 protein_coding Homo_sapiens 0 863
ENST00000507360 ST8SIA4-004 processed_transcript Homo_sapiens 0 351
ENST00000523381 ST8SIA4-003 nonsense_mediated_decay Homo_sapiens 0 374

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