C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182213 Arhgap12-006 ENSMUSG00000041225 10090 - 18:6025197-6135960 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000182213
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000182213 1.725±0.09 1.131±0.00 4.973±1.20 3.248±0.00 2.331±1.01 2.785±0.73 1.608±0.56 1.718±0.54 1.572±0.33 2.494±0.69 1.353±0.60 1.766±0.80 1.910±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R1 CIL_0000R1_0002 CGP 18:5591860-6136098
CIL_0000R0 CIL_0000R0_0002 CGP 18:6024427-6242174

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000050403 arhgap12a-201 protein_coding Danio_rerio 0.000002 60
ENSDART00000142804 arhgap12a-001 protein_coding Danio_rerio 0.000002 60
ENST00000311380 ARHGAP12-001 protein_coding Homo_sapiens 0 2551
ENST00000344936 ARHGAP12-009 protein_coding Homo_sapiens 0 3949
ENST00000375245 ARHGAP12-201 protein_coding Homo_sapiens 0 2621
ENST00000375250 ARHGAP12-008 protein_coding Homo_sapiens 0 2241
ENST00000396144 ARHGAP12-202 protein_coding Homo_sapiens 0 3897
ENST00000454919 ARHGAP12-005 protein_coding Homo_sapiens 0 747
ENST00000492028 ARHGAP12-002 processed_transcript Homo_sapiens 0 2156
ENST00000493008 ARHGAP12-003 processed_transcript Homo_sapiens 0 1321
ENST00000497085 ARHGAP12-004 processed_transcript Homo_sapiens 0 989
ENST00000497103 ARHGAP12-006 processed_transcript Homo_sapiens 0 706

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