C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182559 Arhgap12-001 ENSMUSG00000041225 10090 - 18:6025217-6136098 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182559
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182559 0.813±0.08 1.318±0.41 2.580±0.00 5.591±0.00 0.836±0.36 0.998±0.00 0.555±0.03 1.243±0.34 0.746±0.25 1.271±0.20 1.532±0.37 1.509±0.97 3.693±1.14 2.905±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R1 CIL_0000R1_0002 CGP 18:5591860-6136098
CIL_0000R0 CIL_0000R0_0002 CGP 18:6024427-6242174

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002011 IEA morphogenesis of an epithelial sheet
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000050403 arhgap12a-201 protein_coding Danio_rerio 0.000002 60
ENSDART00000142804 arhgap12a-001 protein_coding Danio_rerio 0.000002 60
ENST00000311380 ARHGAP12-001 protein_coding Homo_sapiens 0 2610
ENST00000344936 ARHGAP12-009 protein_coding Homo_sapiens 0 3886
ENST00000375245 ARHGAP12-201 protein_coding Homo_sapiens 0 2556
ENST00000375250 ARHGAP12-008 protein_coding Homo_sapiens 0 2237
ENST00000396144 ARHGAP12-202 protein_coding Homo_sapiens 0 3991
ENST00000454919 ARHGAP12-005 protein_coding Homo_sapiens 0 806
ENST00000492028 ARHGAP12-002 processed_transcript Homo_sapiens 0 2156
ENST00000493008 ARHGAP12-003 processed_transcript Homo_sapiens 0 1321
ENST00000497085 ARHGAP12-004 processed_transcript Homo_sapiens 0 989
ENST00000497103 ARHGAP12-006 processed_transcript Homo_sapiens 0 702

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