C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SMEK homolog 1, suppressor of mek1 (Dictyostelium)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041846 Smek1 10090 - 12:101039409-101083702 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048305 Smek1-201 101039409-101083702 protein_coding
  ENSMUST00000163095 Smek1-202 101039409-101083702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048305ENSMUST00000163095
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048305 3.317±1.28 5.657±0.60 8.061±1.10 3.296±0.81 2.224±0.61 2.092±0.43 3.461±0.50 6.291±2.39 3.347±0.55 2.638±0.95 4.465±3.11 10.134±2.84 4.822±1.12
ENSMUST00000163095 0.682±0.00 1.719±0.11 2.206±0.47 0.887±0.29 1.819±0.00 0.747±0.00 1.331±0.08 2.146±0.32 0.844±0.00 0.741±0.15 4.399±0.05 2.554±0.00 1.406±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AE CIL_0000AE_0002 CGP 12:100912700-101083702
CIL_0000AH CIL_0000AH_0002 CGP 12:101039409-101626009

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006470 IMP protein dephosphorylation
GO:0030289 IDA protein phosphatase 4 complex
GO:0045722 IDA positive regulation of gluconeogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042187 smek1 SMEK homolog 1, suppressor of mek1 (Dictyostelium) protein_coding Danio_rerio
ENSG00000100796 SMEK1 SMEK homolog 1, suppressor of mek1 (Dictyostelium) protein_coding Homo_sapiens

Loading