Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	SMEK homolog 1, suppressor of mek1 (Dictyostelium)
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000041846	Smek1	10090	-	12:101039409-101083702	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000048305		Smek1-201	101039409-101083702	protein_coding
	ENSMUST00000163095		Smek1-202	101039409-101083702	protein_coding
Mus musculus EnsemblGRCm38 Genome Exciting message Genes Gene structures from Ensembl Connecting Transcripts Structures from Ensembl Connecting Powered by Dalliance 0.11.11

Expression Patterns

Transcript ID	Adipose	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000048305	3.317±1.28	5.657±0.60	8.061±1.10	3.296±0.81	2.224±0.61	2.092±0.43	3.461±0.50	6.291±2.39	3.347±0.55	2.638±0.95	4.465±3.11	10.134±2.84	4.822±1.12
ENSMUST00000163095	0.682±0.00	1.719±0.11	2.206±0.47	0.887±0.29	1.819±0.00	0.747±0.00	1.331±0.08	2.146±0.32	0.844±0.00	0.741±0.15	4.399±0.05	2.554±0.00	1.406±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0000AE	CIL_0000AE_0002	CGP	12:100912700-101083702
CIL_0000AH	CIL_0000AH_0002	CGP	12:101039409-101626009

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005515	IPI	protein binding
GO:0005634	IDA	nucleus
GO:0005737	IDA	cytoplasm
GO:0005856	IEA	cytoskeleton
GO:0006470	IMP	protein dephosphorylation
GO:0030289	IDA	protein phosphatase 4 complex
GO:0045722	IDA	positive regulation of gluconeogenesis

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000042187	smek1	SMEK homolog 1, suppressor of mek1 (Dictyostelium)	protein_coding	Danio_rerio
ENSG00000100796	SMEK1	SMEK homolog 1, suppressor of mek1 (Dictyostelium)	protein_coding	Homo_sapiens

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