C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP synthase mitochondrial F1 complex assembly factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042709 Atpaf2 10090 - 11:60400626-60418457 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000108721 Atpaf2-001 60400626-60417051 protein_coding
  ENSMUST00000138696 Atpaf2-003 60403837-60417042 processed_transcript
  ENSMUST00000141987 Atpaf2-002 60407373-60418457 processed_transcript
  ENSMUST00000145532 Atpaf2-005 60401478-60417018 nonsense_mediated_decay
  ENSMUST00000154387 Atpaf2-004 60405794-60417035 processed_transcript
  ENSMUST00000156966 Atpaf2-006 60409215-60417036 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108721ENSMUST00000138696ENSMUST00000145532ENSMUST00000156966
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108721 28.867±8.14 27.366±3.12 8.862±0.96 9.459±1.67 24.239±7.82 10.369±2.60 12.554±1.37 15.755±2.29 12.365±2.55 8.884±1.70 9.777±1.03 10.149±4.20 7.713±2.94 17.781±2.96
ENSMUST00000138696 N/A N/A N/A 16.026±0.00 N/A N/A N/A N/A N/A N/A N/A 14.823±6.47 15.371±9.17 25.031±11.85
ENSMUST00000145532 N/A N/A N/A 7.528±0.00 N/A N/A N/A N/A N/A N/A N/A 10.675±0.00 10.368±1.77 22.739±19.86
ENSMUST00000156966 N/A 12.745±3.22 N/A N/A N/A 7.270±1.07 N/A N/A N/A N/A N/A 13.272±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DY CIL_0000DY_0002 CGP 11:60353329-60418457
CIL_0000DZ CIL_0000DZ_0002 CGP 11:60400626-60450927

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016607 IEA nuclear speck
GO:0043461 IEA proton-transporting ATP synthase complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056270 atpaf2 ATP synthase mitochondrial F1 complex assembly factor 2 protein_coding Danio_rerio
ENSG00000171953 ATPAF2 ATP synthase mitochondrial F1 complex assembly factor 2 protein_coding Homo_sapiens

Loading