C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATP synthase mitochondrial F1 complex assembly factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156966 Atpaf2-006 ENSMUSG00000042709 10090 - 11:60409215-60417036 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryENSMUST00000156966
Transcript ID Adrenal Colon Ovary
ENSMUST00000156966 12.745±3.22 7.270±1.07 13.272±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DY CIL_0000DY_0002 CGP 11:60353329-60418457
CIL_0000DZ CIL_0000DZ_0002 CGP 11:60400626-60450927

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000444058 ATPAF2-015 protein_coding Homo_sapiens 0 339
ENST00000462733 ATPAF2-003 nonsense_mediated_decay Homo_sapiens 2e-26 124
ENST00000474627 ATPAF2-001 protein_coding Homo_sapiens 0 355
ENST00000497871 ATPAF2-006 retained_intron Homo_sapiens 0 372
ENST00000577586 ATPAF2-012 processed_transcript Homo_sapiens 0 353
ENST00000584205 ATPAF2-020 nonsense_mediated_decay Homo_sapiens 2e-31 141
ENST00000585101 ATPAF2-013 protein_coding Homo_sapiens 7e-32 141

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