C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dead end homolog 1 (zebrafish)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044595 Dnd1 10090 - 18:36763671-36766214 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061522 Dnd1-001 36763673-36766198 protein_coding
  ENSMUST00000124038 Dnd1-003 36763675-36766198 retained_intron
  ENSMUST00000155827 Dnd1-002 36763671-36766214 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungOvaryTestisENSMUST00000061522ENSMUST00000124038ENSMUST00000155827
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Ovary Testis
ENSMUST00000061522 10.082±1.79 2.047±0.38 1.346±0.22 1.232±0.20 1.818±0.42 0.719±0.24 1.283±0.25 6.143±1.31 1.112±0.05
ENSMUST00000124038 N/A N/A N/A 0.972±0.00 N/A N/A N/A 1.431±0.00 N/A
ENSMUST00000155827 N/A N/A N/A 1.045±0.00 N/A N/A 0.557±0.00 1.467±0.00 1.884±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZH CIL_0006ZH_0002 CGP 18:36744656-36763708
CIL_0006ZK CIL_0006ZK_0002 CGP 18:36760239-36766214
CIL_0006ZJ CIL_0006ZJ_0002 CGP 18:36763671-36783205

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0007281 IMP germ cell development
GO:0017091 ISS AU-rich element binding
GO:0060965 ISS negative regulation of gene silencing by miRNA

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022813 dnd dead end protein_coding Danio_rerio
ENSG00000256453 DND1 DND microRNA-mediated repression inhibitor 1 protein_coding Homo_sapiens

Loading