C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 33
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048271 Rbm33 10090 + 5:28317121-28419244 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030920 Rbm33-001 28317202-28353664 protein_coding
  ENSMUST00000059644 Rbm33-201 28317189-28419242 protein_coding
  ENSMUST00000090355 Rbm33-002 28317121-28352868 protein_coding
  ENSMUST00000114884 Rbm33-003 28317177-28419244 protein_coding
  ENSMUST00000133313 Rbm33-004 28410661-28414029 protein_coding
  ENSMUST00000144967 Rbm33-005 28394632-28413677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030920ENSMUST00000059644ENSMUST00000090355ENSMUST00000114884
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030920 N/A N/A N/A 3.648±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.133±0.00 5.035±0.00
ENSMUST00000059644 1.436±0.00 7.682±2.25 4.541±0.80 6.858±0.99 2.014±0.55 N/A N/A 2.027±0.00 2.470±0.65 N/A 5.214±1.17 5.899±1.86 4.117±1.44 2.456±0.30
ENSMUST00000090355 N/A 29.790±4.42 N/A 11.760±0.00 N/A N/A N/A N/A N/A N/A N/A 16.157±0.00 14.309±2.41 8.822±0.00
ENSMUST00000114884 6.901±2.40 6.876±4.03 4.718±1.03 8.803±3.15 10.759±5.10 10.893±3.99 3.669±0.90 7.050±0.75 4.837±1.07 10.262±1.82 0.962±0.00 11.748±4.02 2.640±0.28 5.741±2.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KT CIL_0008KT_0002 VISTA 5:27878923-28480422
CIL_000962 CIL_000962_0002 VISTA 5:28103755-28704882
CIL_0006DB CIL_0006DB_0003 CGP 5:28200819-28419244
CIL_0006DC CIL_0006DC_0003 CGP 5:28317121-28467101

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094896 RBM33 RNA binding motif protein 33 protein_coding Danio_rerio
ENSG00000184863 RBM33 RNA binding motif protein 33 protein_coding Homo_sapiens

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