C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090355 Rbm33-002 ENSMUSG00000048271 10090 + 5:28317121-28352868 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000090355
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000090355 29.790±4.42 11.760±0.00 16.157±0.00 14.309±2.41 8.822±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KT CIL_0008KT_0002 VISTA 5:27878923-28480422
CIL_000962 CIL_000962_0002 VISTA 5:28103755-28704882
CIL_0006DB CIL_0006DB_0003 CGP 5:28200819-28419244
CIL_0006DC CIL_0006DC_0003 CGP 5:28317121-28467101

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287912 RBM33-008 protein_coding Homo_sapiens 0 1074
ENST00000307403 RBM33-009 nonsense_mediated_decay Homo_sapiens 0 773
ENST00000392759 RBM33-005 protein_coding Homo_sapiens 0 771
ENST00000392761 RBM33-003 protein_coding Homo_sapiens 3e-17 95
ENST00000401878 RBM33-007 protein_coding Homo_sapiens 0 1050
ENST00000440108 RBM33-010 protein_coding Homo_sapiens 0 534

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