C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 33
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184863 RBM33 9606 + 7:155644451-155781485 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000287912 RBM33-008 155644451-155701183 protein_coding
  ENST00000307403 RBM33-009 155672880-155745720 nonsense_mediated_decay
  ENST00000341148 RBM33-001 155746586-155781485 protein_coding
  ENST00000392755 RBM33-004 155766556-155775460 protein_coding
  ENST00000392759 RBM33-005 155644702-155701490 protein_coding
  ENST00000392761 RBM33-003 155700891-155766896 protein_coding
  ENST00000401878 RBM33-007 155644679-155781479 protein_coding
  ENST00000438356 RBM33-002 155746419-155766556 protein_coding
  ENST00000440108 RBM33-010 155680669-155737593 protein_coding
  ENST00000486747 RBM33-006 155706814-155718435 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287912ENST00000341148ENST00000392761ENST00000401878
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287912 N/A N/A 18.747±0.00 19.834±0.00 21.245±0.00 18.669±0.00 N/A N/A 19.892±0.00 N/A 5.063±0.00 9.896±0.00 3.465±3.03 11.149±0.00
ENST00000341148 N/A 3.486±0.00 N/A N/A 2.371±0.00 N/A 0.576±0.00 1.751±0.00 0.564±0.00 3.575±0.00 N/A 3.298±1.09 0.240±0.00 N/A
ENST00000392761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.816±0.00 N/A
ENST00000401878 3.940±0.00 4.570±0.00 2.291±0.00 3.278±2.13 2.853±1.10 2.600±0.06 1.475±1.13 2.191±0.50 1.764±0.37 3.806±1.93 4.752±0.00 2.361±0.08 1.053±0.29 3.962±1.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KT CIL_0008KT_0001 VISTA 7:155171352-155773114
CIL_000962 CIL_000962_0001 VISTA 7:155454922-156056094
CIL_0006DB CIL_0006DB_0002 CGP 7:155474206-155781485
CIL_0006DC CIL_0006DC_0002 CGP 7:155644451-155812273

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094896 RBM33 RNA binding motif protein 33 protein_coding Danio_rerio
ENSMUSG00000048271 Rbm33 RNA binding motif protein 33 protein_coding Mus_musculus

Loading