C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleoporin like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048439 Nupl2 10090 + 5:24164963-24184013 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049887 Nupl2-001 24164963-24184013 protein_coding
  ENSMUST00000115101 Nupl2-002 24165000-24182837 nonsense_mediated_decay
  ENSMUST00000124150 Nupl2-004 24177904-24181432 processed_transcript
  ENSMUST00000147392 Nupl2-003 24167508-24169881 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049887ENSMUST00000115101ENSMUST00000147392
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049887 1.313±0.72 0.803±0.31 2.182±0.02 2.057±0.90 1.240±0.32 1.472±0.30 0.969±0.21 1.050±0.33 1.750±0.57 0.970±0.18 1.264±0.35 1.464±0.60 1.523±0.67 6.873±1.82
ENSMUST00000115101 1.808±0.88 3.795±0.78 1.375±0.44 1.224±0.40 1.722±0.70 2.023±0.68 1.539±0.42 0.614±0.21 0.862±0.46 1.333±0.29 0.898±0.24 2.342±0.91 1.299±0.63 21.492±6.29
ENSMUST00000147392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.733±0.00 0.945±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_00022N CIL_00022N_0002 CGP 5:24100590-24184013

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005643 IEA nuclear pore
GO:0015031 IEA protein transport
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029043 nupl2 nucleoporin like 2 protein_coding Danio_rerio
ENSG00000136243 NUPL2 nucleoporin like 2 protein_coding Homo_sapiens

Loading