C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147392 Nupl2-003 ENSMUSG00000048439 10090 + 5:24167508-24169881 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000147392
Transcript ID Ovary Placenta
ENSMUST00000147392 0.733±0.00 0.945±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_00022N CIL_00022N_0002 CGP 5:24100590-24184013

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258742 NUPL2-001 protein_coding Homo_sapiens 8.99998e-41 172
ENST00000410002 NUPL2-008 protein_coding Homo_sapiens 4.00001e-40 169
ENST00000413919 NUPL2-002 protein_coding Homo_sapiens 5.99994e-41 172
ENST00000438012 NUPL2-003 nonsense_mediated_decay Homo_sapiens 8.00001e-41 172
ENST00000485250 NUPL2-004 retained_intron Homo_sapiens 9.99995e-41 172
ENST00000487595 NUPL2-009 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000497500 NUPL2-007 retained_intron Homo_sapiens 6.02558e-44 182

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