C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myoferlin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048612 Myof 10090 - 19:37899036-38043577 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041475 Myof-201 37899036-38043577 protein_coding
  ENSMUST00000172095 Myof-202 37899036-38043577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041475ENSMUST00000172095
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041475 5.176±2.03 0.931±0.43 43.729±11.96 0.333±0.18 3.090±0.80 3.991±1.70 0.573±0.21 4.295±0.96 0.499±0.70 12.562±0.28 0.556±0.21 7.828±8.08 29.851±21.38 0.291±0.10
ENSMUST00000172095 N/A 0.445±0.15 N/A N/A 0.573±0.00 N/A N/A N/A 0.068±0.01 N/A N/A 2.263±1.41 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZY CIL_0000ZY_0002 CGP 19:37697808-38043577
CIL_0000ZZ CIL_0000ZZ_0002 CGP 19:37899036-38074425

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001778 IMP plasma membrane repair
GO:0005543 IMP phospholipid binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0005901 IDA caveola
GO:0016021 IEA integral component of membrane
GO:0030947 IMP regulation of vascular endothelial growth factor receptor signaling pathway
GO:0031410 IEA cytoplasmic vesicle
GO:0034605 IDA cellular response to heat
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006112 myof myoferlin protein_coding Danio_rerio
ENSDARG00000017128 MYOF Uncharacterized protein protein_coding Danio_rerio
ENSG00000138119 MYOF myoferlin protein_coding Homo_sapiens

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