C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: myoferlin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172095 Myof-202 ENSMUSG00000048612 10090 - 19:37899036-38043577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverOvaryENSMUST00000172095
Transcript ID Adrenal Breast Liver Ovary
ENSMUST00000172095 0.445±0.15 0.573±0.00 0.068±0.01 2.263±1.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZY CIL_0000ZY_0002 CGP 19:37697808-38043577
CIL_0000ZZ CIL_0000ZZ_0002 CGP 19:37899036-38074425

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0034605 IDA cellular response to heat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358334 MYOF-004 protein_coding Homo_sapiens 0 7513
ENST00000359263 MYOF-005 protein_coding Homo_sapiens 0 5801
ENST00000371488 MYOF-002 protein_coding Homo_sapiens 0 556
ENST00000371489 MYOF-003 protein_coding Homo_sapiens 0 1642
ENST00000463743 MYOF-006 nonsense_mediated_decay Homo_sapiens 0 2987
ENST00000475358 MYOF-007 processed_transcript Homo_sapiens 1e-33 147
ENST00000485212 MYOF-008 processed_transcript Homo_sapiens 0 433
ENST00000488645 MYOF-001 processed_transcript Homo_sapiens 0 435

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