C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000ZZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138119-ENSG00000138180 CGP 9606 10:93306429-93529092
GeneTranscriptPositionBiotype
ENSG00000138119 (MYOF)
myoferlin 		ENST00000358334 (MYOF-004) 93306430-93482194 protein_coding
ENST00000359263 (MYOF-005) 93306430-93482194 protein_coding
ENST00000371488 (MYOF-002) 93425741-93482194 protein_coding
ENST00000371489 (MYOF-003) 93397185-93482317 protein_coding
ENST00000463743 (MYOF-006) 93306429-93379987 nonsense_mediated_decay
ENST00000474161 (MYOF-009) 93323118-93323675 retained_intron
ENST00000475358 (MYOF-007) 93337528-93340249 processed_transcript
ENST00000485212 (MYOF-008) 93324270-93329773 processed_transcript
ENST00000488645 (MYOF-001) 93426071-93482194 processed_transcript
ENSG00000138180 (CEP55)
centrosomal protein 55kDa 		ENST00000371485 (CEP55-001) 93496632-93529092 protein_coding
ENST00000445435 (CEP55-002) 93507010-93519111 protein_coding
ENST00000496302 (CEP55-003) 93517207-93520277 processed_transcript
CIL_0000ZZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048612-ENSMUSG00000024989 CGP 10090 19:37899036-38074425
GeneTranscriptPositionBiotype
ENSMUSG00000024989 (Cep55)
centrosomal protein 55 		ENSMUST00000096096 (Cep55-201) 38055025-38074425 protein_coding
ENSMUST00000116506 (Cep55-202) 38055040-38073498 protein_coding
ENSMUST00000169673 (Cep55-203) 38055042-38074425 protein_coding
ENSMUSG00000048612 (Myof)
myoferlin 		ENSMUST00000041475 (Myof-201) 37899036-38043577 protein_coding
ENSMUST00000172095 (Myof-202) 37899036-38043577 protein_coding
ENSMUSG00000069554 (I830134H01Rik)
RIKEN cDNA I830134H01 gene 		ENSMUST00000092265 (I830134H01Rik-201) 38051884-38054528 lincRNA
ENSMUST00000181592 (I830134H01Rik-001) 38051774-38054528 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZZ_0001ENSG00000138119ENST00000358334ENST00000359263ENST00000371488ENST00000371489ENST00000463743ENST00000474161ENST00000475358ENST00000485212ENST00000488645ENSG00000138180ENST00000371485ENST00000445435ENST00000496302CIL_0000ZZ_0002ENSMUSG00000024989ENSMUST00000096096ENSMUST00000116506ENSMUST00000169673ENSMUSG00000048612ENSMUST00000041475ENSMUST00000172095ENSMUSG00000069554ENSMUST00000092265ENSMUST00000181592
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZZ_0001ENSG00000138119ENST00000358334ENST00000359263ENST00000463743ENSG00000138180ENST00000371485ENST00000445435ENST00000496302CIL_0000ZZ_0002ENSMUSG00000024989ENSMUST00000096096ENSMUST00000116506ENSMUST00000169673ENSMUSG00000048612ENSMUST00000041475ENSMUST00000172095ENSMUSG00000069554ENSMUST00000092265ENSMUST00000181592
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138119 ENST00000358334 N/A N/A 0.738±0.00 N/A 1.687±0.00 N/A N/A 0.056±0.00 0.182±0.00 1.242±0.00 N/A 1.449±0.00 3.829±0.00 N/A
ENST00000359263 15.542±0.00 6.485±0.00 0.714±0.00 0.439±0.25 7.810±0.22 6.077±2.85 2.870±0.00 7.925±0.00 4.513±4.23 2.458±0.42 1.697±0.00 5.390±0.70 10.418±2.95 6.082±0.00
ENST00000371488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463743 5.782±0.00 3.246±0.00 0.643±0.00 0.330±0.00 7.799±0.00 4.730±0.00 2.876±0.00 3.727±0.00 0.154±0.00 4.322±0.00 0.634±0.00 2.972±0.86 6.079±1.56 3.445±0.00
ENST00000474161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138180 ENST00000371485 0.201±0.00 0.397±0.00 N/A 0.011±0.00 0.836±0.41 0.549±0.13 0.131±0.10 0.074±0.00 0.037±0.01 0.227±0.00 N/A 3.587±2.25 1.333±0.27 13.276±2.21
ENST00000445435 N/A N/A N/A N/A 1.334±0.00 N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A
ENST00000496302 N/A 0.442±0.00 N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024989 ENSMUST00000096096 0.285±0.00 N/A 0.262±0.13 2.328±2.02 0.267±0.24 0.999±0.88 0.070±0.05 0.074±0.03 1.879±1.48 0.182±0.00 0.043±0.02 1.432±0.78 4.343±2.25 2.926±1.29
ENSMUST00000116506 N/A 0.220±0.00 N/A 0.059±0.00 N/A N/A N/A 0.060±0.00 N/A N/A 0.026±0.00 1.747±0.00 1.524±1.19 4.055±0.00
ENSMUST00000169673 0.667±0.36 0.361±0.18 0.266±0.18 1.220±0.37 0.283±0.14 1.120±0.10 0.084±0.00 0.080±0.04 0.551±0.14 0.322±0.06 N/A 1.514±0.86 1.631±0.17 2.038±0.68
ENSMUSG00000048612 ENSMUST00000041475 5.176±2.03 0.931±0.43 43.729±11.96 0.333±0.18 3.090±0.80 3.991±1.70 0.573±0.21 4.295±0.96 0.499±0.70 12.562±0.28 0.556±0.21 7.828±8.08 29.851±21.38 0.291±0.10
ENSMUST00000172095 N/A 0.445±0.15 N/A N/A 0.573±0.00 N/A N/A N/A 0.068±0.01 N/A N/A 2.263±1.41 N/A N/A
ENSMUSG00000069554 ENSMUST00000092265 0.028±0.01 N/A 0.087±0.00 0.054±0.00 0.038±0.02 0.027±0.01 N/A N/A 0.020±0.01 0.031±0.01 N/A 0.072±0.04 0.060±0.04 0.070±0.01
ENSMUST00000181592 N/A 0.072±0.00 0.089±0.00 0.028±0.01 N/A 0.022±0.00 N/A N/A N/A N/A N/A 0.147±0.00 0.026±0.00 N/A

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