C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LY6/PLAUR domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050447 Lypd6 10090 + 2:50066429-50193569 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053208 Lypd6-001 50066464-50193564 protein_coding
  ENSMUST00000112712 Lypd6-201 50066429-50193569 protein_coding
  ENSMUST00000126337 Lypd6-003 50165401-50173694 protein_coding
  ENSMUST00000128451 Lypd6-002 50066462-50190670 protein_coding
  ENSMUST00000169232 Lypd6-202 50128369-50193563 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053208ENSMUST00000112712ENSMUST00000126337ENSMUST00000128451ENSMUST00000169232
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053208 N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A 0.059±0.00 0.061±0.02
ENSMUST00000112712 0.470±0.39 4.527±0.97 0.970±0.24 1.715±0.79 0.251±0.15 0.560±0.28 0.095±0.09 0.914±0.33 0.072±0.04 0.601±0.20 0.291±0.05 0.943±0.38 0.312±0.13 0.154±0.07
ENSMUST00000126337 N/A N/A N/A N/A N/A N/A N/A 3.849±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000128451 1.449±1.25 28.340±4.82 N/A 2.727±0.00 0.926±0.23 1.820±0.69 0.431±0.00 3.099±0.87 0.193±0.05 1.145±0.49 0.609±0.00 4.001±1.76 0.617±0.11 0.744±0.20
ENSMUST00000169232 N/A N/A N/A 0.407±0.00 N/A 0.124±0.01 0.163±0.00 N/A 0.041±0.03 N/A N/A 0.486±0.00 0.121±0.03 0.072±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MG CIL_0006MG_0002 CGP 2:49787688-50193569
CIL_0007E0 CIL_0007E0_0002 CGP 2:50066429-50296801

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004307 lypd6 LY6/PLAUR domain containing 6 protein_coding Danio_rerio
ENSG00000187123 LYPD6 LY6/PLAUR domain containing 6 protein_coding Homo_sapiens

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