C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LY6/PLAUR domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112712 Lypd6-201 ENSMUSG00000050447 10090 + 2:50066429-50193569 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112712
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112712 0.470±0.39 4.527±0.97 0.970±0.24 1.715±0.79 0.251±0.15 0.560±0.28 0.095±0.09 0.914±0.33 0.072±0.04 0.601±0.20 0.291±0.05 0.943±0.38 0.312±0.13 0.154±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MG CIL_0006MG_0002 CGP 2:49787688-50193569
CIL_0007E0 CIL_0007E0_0002 CGP 2:50066429-50296801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334166 LYPD6-001 protein_coding Homo_sapiens 0 824
ENST00000392854 LYPD6-004 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000409381 LYPD6-003 protein_coding Homo_sapiens 0 715
ENST00000414420 LYPD6-005 protein_coding Homo_sapiens 0 283
ENST00000418762 LYPD6-002 nonsense_mediated_decay Homo_sapiens 0 414

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