C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LY6/PLAUR domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128451 Lypd6-002 ENSMUSG00000050447 10090 + 2:50066462-50190670 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000128451
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000128451 1.449±1.25 28.340±4.82 2.727±0.00 0.926±0.23 1.820±0.69 0.431±0.00 3.099±0.87 0.193±0.05 1.145±0.49 0.609±0.00 4.001±1.76 0.617±0.11 0.744±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MG CIL_0006MG_0002 CGP 2:49787688-50193569
CIL_0007E0 CIL_0007E0_0002 CGP 2:50066429-50296801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334166 LYPD6-001 protein_coding Homo_sapiens 0 662
ENST00000392854 LYPD6-004 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000409381 LYPD6-003 protein_coding Homo_sapiens 0 556
ENST00000414420 LYPD6-005 protein_coding Homo_sapiens 0 283
ENST00000418762 LYPD6-002 nonsense_mediated_decay Homo_sapiens 0 414

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