C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051022 Hs3st1 10090 - 5:39613935-39755475 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053116 Hs3st1-002 39613939-39644634 protein_coding
  ENSMUST00000117944 Hs3st1-001 39613935-39755475 protein_coding
  ENSMUST00000137142 Hs3st1-003 39614769-39645246 protein_coding
  ENSMUST00000152057 Hs3st1-004 39615074-39644597 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053116ENSMUST00000117944ENSMUST00000137142
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053116 3.541±0.73 7.314±0.43 9.741±1.22 7.434±3.04 3.949±1.17 7.824±0.99 1.179±0.41 1.473±0.56 0.161±0.05 16.614±3.71 0.518±0.13 28.709±6.94 15.791±8.49 0.316±0.15
ENSMUST00000117944 N/A N/A N/A N/A N/A N/A 2.642±1.01 N/A 0.146±0.12 N/A N/A N/A N/A 0.107±0.08
ENSMUST00000137142 1.341±0.00 N/A N/A 5.521±1.82 1.053±0.00 N/A N/A N/A 0.127±0.06 N/A N/A N/A N/A 0.210±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XI CIL_0001XI_0002 CGP 5:38706462-39755475
CIL_0001XJ CIL_0001XJ_0002 CGP 5:39613935-41708155

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IEA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0008467 IEA [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012249 hs3st1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein_coding Danio_rerio
ENSG00000002587 HS3ST1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein_coding Homo_sapiens

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