C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137142 Hs3st1-003 ENSMUSG00000051022 10090 - 5:39614769-39645246 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastLiverTestisENSMUST00000137142
Transcript ID Adipose Brain Breast Liver Testis
ENSMUST00000137142 1.341±0.00 5.521±1.82 1.053±0.00 0.127±0.06 0.210±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XI CIL_0001XI_0002 CGP 5:38706462-39755475
CIL_0001XJ CIL_0001XJ_0002 CGP 5:39613935-41708155

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008146 IEA sulfotransferase activity
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000002596 HS3ST1-001 protein_coding Homo_sapiens 0 453
ENST00000510712 HS3ST1-002 protein_coding Homo_sapiens 8e-31 137
ENST00000514690 HS3ST1-003 protein_coding Homo_sapiens 8e-31 137

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