C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117944 Hs3st1-001 ENSMUSG00000051022 10090 - 5:39613935-39755475 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverTestisENSMUST00000117944
Transcript ID Heart Liver Testis
ENSMUST00000117944 2.642±1.01 0.146±0.12 0.107±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XI CIL_0001XI_0002 CGP 5:38706462-39755475
CIL_0001XJ CIL_0001XJ_0002 CGP 5:39613935-41708155

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IEA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0008467 IEA [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000002596 HS3ST1-001 protein_coding Homo_sapiens 0 1256
ENST00000510712 HS3ST1-002 protein_coding Homo_sapiens 8e-31 137
ENST00000514690 HS3ST1-003 protein_coding Homo_sapiens 8e-31 137

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