C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053116 Hs3st1-002 ENSMUSG00000051022 10090 - 5:39613939-39644634 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053116 3.541±0.73 7.314±0.43 9.741±1.22 7.434±3.04 3.949±1.17 7.824±0.99 1.179±0.41 1.473±0.56 0.161±0.05 16.614±3.71 0.518±0.13 28.709±6.94 15.791±8.49 0.316±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XI CIL_0001XI_0002 CGP 5:38706462-39755475
CIL_0001XJ CIL_0001XJ_0002 CGP 5:39613935-41708155

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IEA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0008467 IEA [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000002596 HS3ST1-001 protein_coding Homo_sapiens 0 1293
ENST00000510712 HS3ST1-002 protein_coding Homo_sapiens 8e-31 137
ENST00000514690 HS3ST1-003 protein_coding Homo_sapiens 8e-31 137

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