C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: par-3 family cell polarity regulator beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046673 Pard3b-002 ENSMUSG00000052062 10090 + 1:61639243-62637923 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000046673
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000046673 0.526±0.00 1.625±0.51 0.701±0.00 1.550±0.15 0.519±0.00 0.933±0.19 0.185±0.00 1.384±0.22 1.114±0.15 0.858±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R0 CIL_0001R0_0002 CGP 1:60977927-62642284
CIL_0001R1 CIL_0001R1_0002 CGP 1:61638824-62818695

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349953 PARD3B-004 protein_coding Homo_sapiens 0 1580
ENST00000351153 PARD3B-003 protein_coding Homo_sapiens 0 1580
ENST00000358768 PARD3B-002 protein_coding Homo_sapiens 0 3485
ENST00000406610 PARD3B-001 protein_coding Homo_sapiens 0 1908
ENST00000415947 PARD3B-006 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000462231 PARD3B-005 protein_coding Homo_sapiens 0 1580
ENST00000471958 PARD3B-007 processed_transcript Homo_sapiens 2.94273e-44 182
ENST00000488622 PARD3B-008 processed_transcript Homo_sapiens 0 481
ENST00000489565 PARD3B-009 processed_transcript Homo_sapiens 0 409
ENST00000613457 PARD3B-201 protein_coding Homo_sapiens 0 3158
ENST00000614500 PARD3B-202 protein_coding Homo_sapiens 0 1253
ENST00000622699 PARD3B-203 protein_coding Homo_sapiens 0 1253

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