C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: par-3 family cell polarity regulator beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075374 Pard3b-001 ENSMUSG00000052062 10090 + 1:61638824-62642284 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075374 2.098±1.19 0.867±0.17 5.985±0.99 0.792±0.43 0.967±0.28 2.786±0.19 0.764±0.48 1.245±0.50 0.395±0.11 2.664±0.42 0.545±0.19 2.119±0.44 0.498±0.17 0.665±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R0 CIL_0001R0_0002 CGP 1:60977927-62642284
CIL_0001R1 CIL_0001R1_0002 CGP 1:61638824-62818695

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005923 IEA tight junction
GO:0007049 IEA cell cycle
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349953 PARD3B-004 protein_coding Homo_sapiens 0 2870
ENST00000351153 PARD3B-003 protein_coding Homo_sapiens 0 2342
ENST00000358768 PARD3B-002 protein_coding Homo_sapiens 0 1908
ENST00000406610 PARD3B-001 protein_coding Homo_sapiens 0 3764
ENST00000415947 PARD3B-006 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000462231 PARD3B-005 protein_coding Homo_sapiens 0 2835
ENST00000471958 PARD3B-007 processed_transcript Homo_sapiens 0 231
ENST00000488622 PARD3B-008 processed_transcript Homo_sapiens 0 488
ENST00000489565 PARD3B-009 processed_transcript Homo_sapiens 0 409
ENST00000613457 PARD3B-201 protein_coding Homo_sapiens 0 1916
ENST00000614500 PARD3B-202 protein_coding Homo_sapiens 0 2015
ENST00000622699 PARD3B-203 protein_coding Homo_sapiens 0 2543

Loading