C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: male-specific lethal 1 homolog (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052915 Msl1 10090 + 11:98795516-98807859 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037915 Msl1-001 98795516-98807859 protein_coding
  ENSMUST00000037930 Msl1-003 98798654-98805607 protein_coding
  ENSMUST00000107485 Msl1-004 98795791-98801052 protein_coding
  ENSMUST00000107487 Msl1-002 98795800-98806434 protein_coding
  ENSMUST00000126969 Msl1-005 98800165-98804119 protein_coding
  ENSMUST00000141016 Msl1-006 98804271-98805779 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037915ENSMUST00000037930ENSMUST00000107485ENSMUST00000107487
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037915 8.635±2.93 11.178±2.93 12.309±0.98 19.283±4.13 9.366±3.79 5.789±1.71 5.143±0.13 6.242±0.21 6.285±2.05 12.966±2.02 7.941±0.53 12.711±4.59 5.906±0.84 23.146±6.35
ENSMUST00000037930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 75.816±0.00
ENSMUST00000107485 12.931±3.70 16.602±2.60 16.678±0.87 23.912±8.13 15.583±5.24 11.920±1.91 8.189±0.53 7.551±1.33 7.045±2.97 18.279±2.42 10.655±0.89 17.496±5.50 20.470±9.38 24.200±2.21
ENSMUST00000107487 N/A N/A N/A 20.995±0.00 N/A N/A N/A N/A N/A N/A N/A 21.702±0.00 N/A 31.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_0002GG CIL_0002GG_0002 CGP 11:98767932-98807859
CIL_0007GO CIL_0007GO_0002 CGP 11:98795516-98833814

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0043984 IEA histone H4-K16 acetylation
GO:0072487 ISS MSL complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074734 MSL1 (1 of 2) male-specific lethal 1 homolog (Drosophila) protein_coding Danio_rerio
ENSDARG00000090223 MSL1 (2 of 2) male-specific lethal 1 homolog (Drosophila) protein_coding Danio_rerio
ENSG00000188895 MSL1 male-specific lethal 1 homolog (Drosophila) protein_coding Homo_sapiens

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