C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: male-specific lethal 1 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107485 Msl1-004 ENSMUSG00000052915 10090 + 11:98795791-98801052 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107485
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107485 12.931±3.70 16.602±2.60 16.678±0.87 23.912±8.13 15.583±5.24 11.920±1.91 8.189±0.53 7.551±1.33 7.045±2.97 18.279±2.42 10.655±0.89 17.496±5.50 20.470±9.38 24.200±2.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_0002GG CIL_0002GG_0002 CGP 11:98767932-98807859
CIL_0007GO CIL_0007GO_0002 CGP 11:98795516-98833814

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0072487 ISS MSL complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398532 MSL1-003 protein_coding Homo_sapiens 0 2217
ENST00000577454 MSL1-004 protein_coding Homo_sapiens 0 3230
ENST00000578648 MSL1-005 protein_coding Homo_sapiens 0 2200
ENST00000578826 MSL1-009 retained_intron Homo_sapiens 0 776
ENST00000579565 MSL1-002 protein_coding Homo_sapiens 0 1123
ENST00000582884 MSL1-011 nonsense_mediated_decay Homo_sapiens 0 680
ENST00000582920 MSL1-010 protein_coding Homo_sapiens 0 340

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