C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: male-specific lethal 1 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037915 Msl1-001 ENSMUSG00000052915 10090 + 11:98795516-98807859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037915
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037915 8.635±2.93 11.178±2.93 12.309±0.98 19.283±4.13 9.366±3.79 5.789±1.71 5.143±0.13 6.242±0.21 6.285±2.05 12.966±2.02 7.941±0.53 12.711±4.59 5.906±0.84 23.146±6.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_0002GG CIL_0002GG_0002 CGP 11:98767932-98807859
CIL_0007GO CIL_0007GO_0002 CGP 11:98795516-98833814

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0043984 IEA histone H4-K16 acetylation
GO:0072487 ISS MSL complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339569 MSL1-006 retained_intron Homo_sapiens 0 874
ENST00000398532 MSL1-003 protein_coding Homo_sapiens 0 3502
ENST00000577454 MSL1-004 protein_coding Homo_sapiens 0 2217
ENST00000578648 MSL1-005 protein_coding Homo_sapiens 0 2200
ENST00000578826 MSL1-009 retained_intron Homo_sapiens 0 776
ENST00000579565 MSL1-002 protein_coding Homo_sapiens 0 1958
ENST00000580086 MSL1-007 retained_intron Homo_sapiens 0 592
ENST00000581246 MSL1-012 retained_intron Homo_sapiens 0 276
ENST00000582884 MSL1-011 nonsense_mediated_decay Homo_sapiens 0 684
ENST00000582920 MSL1-010 protein_coding Homo_sapiens 0 340
ENST00000583127 MSL1-013 retained_intron Homo_sapiens 0 523

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