C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007GO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188895-ENSG00000108349 CGP 9606 17:40122298-40172183
GeneTranscriptPositionBiotype
ENSG00000108349 (CASC3)
cancer susceptibility candidate 3 		ENST00000264645 (CASC3-001) 40140323-40172183 protein_coding
ENST00000394114 (CASC3-005) 40168438-40172164 retained_intron
ENST00000418132 (CASC3-004) 40140318-40167080 retained_intron
ENST00000474190 (CASC3-002) 40161797-40166857 nonsense_mediated_decay
ENST00000577605 (CASC3-008) 40163912-40168255 nonsense_mediated_decay
ENST00000579238 (CASC3-011) 40167366-40168119 retained_intron
ENST00000581849 (CASC3-009) 40140537-40162023 retained_intron
ENST00000583649 (CASC3-006) 40140544-40141547 retained_intron
ENST00000583902 (CASC3-010) 40167917-40169379 retained_intron
ENST00000584997 (CASC3-007) 40140842-40161864 protein_coding
ENSG00000188895 (MSL1)
male-specific lethal 1 homolog (Drosophila) 		ENST00000339569 (MSL1-006) 40131001-40136787 retained_intron
ENST00000398532 (MSL1-003) 40122298-40136916 protein_coding
ENST00000577454 (MSL1-004) 40122573-40130293 protein_coding
ENST00000578648 (MSL1-005) 40122584-40134810 protein_coding
ENST00000578826 (MSL1-009) 40123097-40126860 retained_intron
ENST00000579565 (MSL1-002) 40122614-40134450 protein_coding
ENST00000580086 (MSL1-007) 40131991-40136118 retained_intron
ENST00000581246 (MSL1-012) 40130930-40133095 retained_intron
ENST00000582884 (MSL1-011) 40126393-40132042 nonsense_mediated_decay
ENST00000582920 (MSL1-010) 40124577-40129260 protein_coding
ENST00000583127 (MSL1-013) 40131780-40133886 retained_intron
ENSG00000221555 (AC068669.1)
 ENST00000408628 (AC068669.1-201) 40150136-40150222 miRNA
CIL_0007GO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052915-ENSMUSG00000078676 CGP 10090 11:98795516-98833814
GeneTranscriptPositionBiotype
ENSMUSG00000052915 (Msl1)
male-specific lethal 1 homolog (Drosophila) 		ENSMUST00000037915 (Msl1-001) 98795516-98807859 protein_coding
ENSMUST00000037930 (Msl1-003) 98798654-98805607 protein_coding
ENSMUST00000107485 (Msl1-004) 98795791-98801052 protein_coding
ENSMUST00000107487 (Msl1-002) 98795800-98806434 protein_coding
ENSMUST00000126969 (Msl1-005) 98800165-98804119 protein_coding
ENSMUST00000141016 (Msl1-006) 98804271-98805779 processed_transcript
ENSMUSG00000078676 (Casc3)
cancer susceptibility candidate 3 		ENSMUST00000017384 (Casc3-001) 98804905-98833814 protein_coding
ENSMUST00000144220 (Casc3-002) 98810150-98810928 processed_transcript
ENSMUST00000147065 (Casc3-003) 98810161-98822537 processed_transcript
ENSMUST00000169695 (Casc3-201) 98809808-98833806 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GO_0001ENSG00000108349ENST00000264645ENST00000394114ENST00000418132ENST00000474190ENST00000577605ENST00000579238ENST00000581849ENST00000583649ENST00000583902ENST00000584997ENSG00000188895ENST00000339569ENST00000398532ENST00000577454ENST00000578648ENST00000578826ENST00000579565ENST00000580086ENST00000581246ENST00000582884ENST00000582920ENST00000583127ENSG00000221555ENST00000408628CIL_0007GO_0002ENSMUSG00000052915ENSMUST00000037915ENSMUST00000037930ENSMUST00000107485ENSMUST00000107487ENSMUST00000126969ENSMUST00000141016ENSMUSG00000078676ENSMUST00000017384ENSMUST00000144220ENSMUST00000147065ENSMUST00000169695
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GO_0001ENSG00000108349ENST00000264645ENST00000418132ENST00000474190ENSG00000188895ENST00000339569ENST00000398532ENST00000577454ENST00000578648ENST00000578826ENST00000579565ENSG00000221555ENST00000408628CIL_0007GO_0002ENSMUSG00000052915ENSMUST00000037915ENSMUST00000037930ENSMUST00000107485ENSMUST00000107487ENSMUSG00000078676ENSMUST00000017384ENSMUST00000169695
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108349 ENST00000264645 38.735±0.00 22.297±0.00 1.326±0.00 16.341±10.59 15.681±9.44 13.046±7.58 7.315±5.53 12.977±9.20 7.862±2.34 14.865±9.97 12.724±8.46 30.736±18.05 15.530±2.59 48.362±8.32
ENST00000394114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418132 N/A N/A 6.138±0.00 1.549±0.00 2.245±0.00 4.135±0.00 1.591±0.00 N/A 8.466±0.00 3.876±0.00 N/A 3.705±0.00 N/A N/A
ENST00000474190 N/A N/A N/A 3.726±0.00 N/A N/A N/A 2.571±0.00 N/A N/A N/A N/A N/A N/A
ENST00000577605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188895 ENST00000339569 3.439±0.00 2.532±0.00 1.083±0.00 3.385±0.00 1.422±0.00 N/A N/A N/A N/A 2.467±0.00 N/A 2.800±0.01 N/A N/A
ENST00000398532 5.135±0.00 2.541±0.00 N/A 8.314±0.00 4.417±1.76 7.657±5.79 2.426±1.39 3.735±1.41 2.591±0.00 8.521±7.08 5.137±4.10 8.515±4.99 5.406±0.93 19.077±1.67
ENST00000577454 11.526±0.00 16.375±0.00 1.006±0.00 9.993±5.02 7.097±5.08 6.457±2.92 5.082±4.33 7.471±6.46 4.578±3.38 9.491±6.69 5.335±3.36 20.642±4.16 15.798±1.61 22.479±7.42
ENST00000578648 N/A N/A 1.413±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.631±0.00 17.621±0.00 33.451±0.00
ENST00000579565 N/A N/A 1.281±0.00 5.542±0.00 N/A 2.677±0.00 1.054±0.00 1.810±0.00 2.267±0.00 1.702±0.00 N/A 2.913±0.00 N/A 20.815±0.00
ENST00000580086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221555 ENST00000408628 N/A 5.064±0.00 N/A 1.074±0.00 N/A N/A N/A N/A 0.974±0.00 N/A N/A 105.780±0.00 N/A 1.497±0.35
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052915 ENSMUST00000037915 8.635±2.93 11.178±2.93 12.309±0.98 19.283±4.13 9.366±3.79 5.789±1.71 5.143±0.13 6.242±0.21 6.285±2.05 12.966±2.02 7.941±0.53 12.711±4.59 5.906±0.84 23.146±6.35
ENSMUST00000037930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 75.816±0.00
ENSMUST00000107485 12.931±3.70 16.602±2.60 16.678±0.87 23.912±8.13 15.583±5.24 11.920±1.91 8.189±0.53 7.551±1.33 7.045±2.97 18.279±2.42 10.655±0.89 17.496±5.50 20.470±9.38 24.200±2.21
ENSMUST00000107487 N/A N/A N/A 20.995±0.00 N/A N/A N/A N/A N/A N/A N/A 21.702±0.00 N/A 31.061±0.00
ENSMUST00000126969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078676 ENSMUST00000017384 N/A N/A N/A N/A N/A N/A N/A N/A 4.405±0.00 N/A N/A N/A N/A N/A
ENSMUST00000144220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169695 13.806±3.32 21.807±3.51 12.544±1.55 22.517±8.77 13.480±6.49 15.770±2.62 6.183±1.98 9.966±1.08 8.911±3.27 19.286±0.98 6.720±0.50 14.570±4.39 10.095±1.58 13.914±0.40

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