C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell growth regulator with ring finger domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055128 Cgrrf1 10090 + 14:46832134-46854193 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068532 Cgrrf1-001 46832134-46854193 protein_coding
  ENSMUST00000133790 Cgrrf1-003 46832244-46848059 retained_intron
  ENSMUST00000133989 Cgrrf1-004 46832229-46846588 retained_intron
  ENSMUST00000140114 Cgrrf1-002 46832219-46840412 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068532ENSMUST00000133790
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068532 12.525±3.21 11.809±3.70 21.050±2.55 3.519±0.91 11.410±1.49 12.412±3.75 8.938±0.46 17.141±3.11 13.529±4.62 15.540±4.79 26.123±1.16 7.971±2.56 10.602±4.66 32.598±7.52
ENSMUST00000133790 N/A N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A N/A N/A 0.458±0.18 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0002 VISTA 14:46305651-46906520
CIL_00090Z CIL_00090Z_0002 VISTA 14:46310670-46911777
CIL_0000HK CIL_0000HK_0002 CGP 14:46808149-46854193
CIL_0004OT CIL_0004OT_0002 CGP 14:46832134-47105817

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0007050 IEA cell cycle arrest
GO:0008270 IEA zinc ion binding
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037040 cgrrf1 cell growth regulator with ring finger domain 1 protein_coding Danio_rerio
ENSG00000100532 CGRRF1 cell growth regulator with ring finger domain 1 protein_coding Homo_sapiens

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